First off, don't let the dealer wash / 'protect' / 'buff' etc your vehicle. Now that they have messed it up, your only recourse with them should be to get them to pay to have it professionally resolved by a detailer or body shop of your choice. Choose wisely.
At any rate, those are hologram marks /buffer burn / rids / whatever you want to call them. Caused by improper washing, improper surface prep, improper polishing / sealing / using a dirty pad / etc. They can be repaired by buffing out the surface and getting things right again, but like I said, don't let the dealer do this as they have already displayed how much they care about your vehicle.