One thing you need to remember is this:
They are the same engine. Just turned 90 degrees, with a few tweaks to the top end. If you turn your AWP 90 degrees, the turbo and downpipe will be facing the passenger side wheel well, instead of going straight back down the tunnel.
You can keep the exhaust mani and turbo on your built motor, but you would need a modified downpipe to get the exhaust flowing the right way (assuming you use the A4 trans and mounts).
electricals won't be an issue as long as you use the A4 ecu and wiring. There shouldn't be any splicing needed since these are both early 1.8t motors. That means they are both narrow band and cable throttle.
I would use the A4 ECM and just have it flashed to deal with the built motor rather than using the GTI ECM, for a couple reasons:
- The A4 ECM will work with the A4 instrument cluster without issue. If you try to use the ECM from your GTI, it will not work with the A4 cluster without recoding.
- Also, the GTI ECM will not have provisions for quattro (if the A4 is a quattro car)